phenix

Summary

Source: http://www.phenix-online.org/

License: PHENIX is available without cost to users for non-profit work. It can not be re-distributed! Please check the License Details

Documentation: http://www.phenix-online.org/documentation/

Path: /opt/xray/phenix (links to /opt/xray/phenix-version). We will supply only a single version per platform.

Citation: Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix. D. Liebschner, P. V. Afonine, M. L. Baker, G. Bunkóczi, V. B. Chen, T. I. Croll, B. Hintze, L.-W. Hung, S. Jain, A. J. McCoy, N. W. Moriarty, R. D. Oeffner, B. K. Poon, M. G. Prisant, R. J. Read, J. S. Richardson, D. C. Richardson, M. D. Sammito, O. V. Sobolev, D. H. Stockwell, T. C. Terwilliger, A. G. Urzhumtsev, L. L. Videau, C. J. Williams, and P. D. Adams. Acta Cryst. (2019). D75, 861-877

PHENIX is a software suite for the automated determination of molecular structures using X-ray crystallography and other methods.

Using phenix

To initialize the environment use the module command:

xwhich phenix

 Provided by module(s)
  ... module load phenix/1.19                                  which phenix: /opt/xray/phenix-1.19/build/bin/phenix 
  ... module load phenix/1.20                                  which phenix: /opt/xray/phenix-1.20/build/bin/phenix 
  ... module load phenix/1.13                                  which phenix: /opt/xray/phenix-1.13/build/bin/phenix 
  ... module load phenix/1.18                                  which phenix: /opt/xray/phenix-1.18/build/bin/phenix 

 Documentation: https://docs.desy.de/maxwell/applications/phenix
 URL:           https://www.phenix-online.org/
 Manual:        https://www.phenix-online.org/